The programs
on this page were written during the course of building
LDMAP_cluster. Some of them are used in the debugging for
LDMAP_cluster, or gaining more information about the dataset,
therefore these programs are pretty basic and might not be
relevant at all.
createBenFile.c
-
This
program creates a list of benchmarked ter files with the correct number of
SNPs according to the SNP dataset.
sniffTerFile.c
- This program identifies dropped SNP from SNP dataset file. It
compares the ter files created from LDMAP and the benchmarked ter files
created from createBenFile.c.
outputSNPgenotype.c
- This program retrieves the Haplotype / Diplotype from the SNP
dataset file when given the name of the SNP. The result are saved in a text
file (genotype.txt).
- A bug is reported regarding the extraction of
diplotype data. It has been fixed (26Jul06).
email:
wwsl@soton.ac.uk
Copyright ©
2006
created 16Apr06
updated 31Dec06
|
